Dr. M. (Marten) Postma
Faculteit der Natuurwetenschappen, Wiskunde en Informatica
Swammerdam Institute for Life Sciences
Bezoekadres
- Science Park 904
- Kamernummer: C2.102
Postadres
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Postbus 1212
1000 BE Amsterdam
Contactgegevens
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Publicaties
2024
- Koncz, M., Lermo Jimenez, M. A., Piebes, D. G. E., Postma, M., & Verschure, P. J. (2024). Single-Molecule Analysis of Transcription Dynamics to Understand the Relationship Between Epigenetic Alterations and Transcriptional Variability. In A. Jeltsch, & M. G. Rots (Eds.), Epigenome Editing: Methods and Protocols (pp. 449-460). (Methods in molecular biology (Clifton, N.J.); Vol. 2842). Humana Press. https://doi.org/10.1007/978-1-0716-4051-7_23 [details]
2021
Arts, J. J. G., Mahlandt, E. K., Grönloh, M. L. B., Schimmel, L., Noordstra, I., Gordon, E., van Steen, A. C. I., Tol, S., Walzog, B., van Rijssel, J., Nolte, M. A., Postma, M., Khuon, S., Heddleston, J. M., Wait, E., Chew, T. L., Winter, M., Montanez, E., Goedhart, J., & van Buul, J. D. (2021). Endothelial junctional membrane protrusions serve as hotspots for neutrophil transmigration. eLife, 10, Article e66074. https://doi.org/10.7554/eLife.66074 [details]- Reinhard, N. R., Van Der Niet, S., Chertkova, A., Postma, M., Hordijk, P. L., Gadella, T. W. J., & Goedhart, J. (2021). Identification of guanine nucleotide exchange factors that increase Cdc42 activity in primary human endothelial cells. Small GTPases, 12(3), 226-240. Advance online publication. https://doi.org/10.1080/21541248.2019.1658509 [details]
- van der Linden, F. H., Mahlandt, E. K., Arts, J. J. G., Beumer, J., Puschhof, J., de Man, S. M. A., Chertkova, A. O., Ponsioen, B., Clevers, H., van Buul, J. D., Postma, M., Gadella Jr., T. W. J., & Goedhart, J. (2021). A turquoise fluorescence lifetime-based biosensor for quantitative imaging of intracellular calcium. Nature Communications, 12, Article 7159. https://doi.org/10.1038/s41467-021-27249-w [details]
- van't Padje, A., Oyarte Galvez, L., Klein, M., Hink, M. A., Postma, M., Shimizu, T., & Kiers, E. T. (2021). Temporal tracking of quantum-dot apatite across in vitro mycorrhizal networks shows how host demand can influence fungal nutrient transfer strategies. The ISME Journal, 15(2), 435–449. https://doi.org/10.1038/s41396-020-00786-w [details]
2020
- Bindels, D. S., Postma, M., Haarbosch, L., van Weeren, L., & Gadella, T. W. J. (2020). Multiparameter screening method for developing optimized red-fluorescent proteins. Nature Protocols, 15(2), 450-478. https://doi.org/10.1038/s41596-019-0250-7 [details]
2019
- Postma, M., & Goedhart, J. (2019). PlotsOfData-A web app for visualizing data together with their summaries. PLoS Biology, 17(3), Article e3000202. https://doi.org/10.1371/journal.pbio.3000202 [details]
- Whiteside, M. D., Werner, G. D. A., Caldas, V. E. A., van't Padje, A., Dupin, S. E., Elbers, B., Bakker, M., Wyatt, G. A. K., Klein, M., Hink, M. A., Postma, M., Vaitla, B., Noë, R., Shimizu, T. S., West, S. A., & Kiers, E. T. (2019). Mycorrhizal Fungi Respond to Resource Inequality by Moving Phosphorus from Rich to Poor Patches across Networks. Current Biology, 29(12), 2043-2050, e1-e8. https://doi.org/10.1016/j.cub.2019.04.061 [details]
2018
- van Unen, J., Botman, D., Yin, T., Wu, Y. I., Hink, M. A., Gadella, T. W. J., Postma, M., & Goedhart, J. (2018). The C-terminus of the oncoprotein TGAT is necessary for plasma membrane association and efficient RhoA-mediated signaling. BMC Cell Biology, 19, Article 6. https://doi.org/10.1186/s12860-018-0155-2 [details]
2017
- Bindels, D. S., Haarbosch, L., van Weeren, L., Postma, M., Wiese, K. E., Mastop, M., Aumonier, S., Gotthard, G., Royant, A., Hink, M. A., & Gadella Jr, T. W. J. (2017). mScarlet: a bright monomeric red fluorescent protein for cellular imaging. Nature Methods, 14(1), 53-56. Advance online publication. https://doi.org/10.1038/nmeth.4074 [details]
- Long, Y., Stahl, Y., Weidtkamp-Peters, S., Postma, M., Zhou, W., Goedhart, J., Sánchez-Pérez, M-I., Gadella, T. W. J., Simon, R., Scheres, B., & Blilou, I. (2017). In vivo FRET–FLIM reveals cell-type-specific protein interactions in Arabidopsis roots. Nature, 548(7665), 97-102. https://doi.org/10.1038/nature23317 [details]
- Mastop, M., Bindels, D. S., Shaner, N. C., Postma, M., Gadella, T. W. J., & Goedhart, J. (2017). Characterization of a spectrally diverse set of fluorescent proteins as FRET acceptors for mTurquoise2. Scientific Reports, 7, Article 11999. https://doi.org/10.1038/s41598-017-12212-x [details]
2016
- Postma, M., & van Haastert, P. J. M. (2016). Mathematics of Experimentally Generated Chemoattractant Gradients. In T. Jin, & D. Hereld (Eds.), Chemotaxis: methods and protocols (pp. 381-396). (Methods in Molecular Biology; No. 1407). Humana Press. https://doi.org/10.1007/978-1-4939-3480-5_26 [details]
- van Unen, J., Rashidfarrokhi, A., Hoogendoorn, E., Postma, M., Gadella, T. W. J., & Goedhart, J. (2016). Quantitative Single-Cell Analysis of Signaling Pathways Activated Immediately Downstream of Histamine Receptor Subtypes. Molecular Pharmacology, 90(3), 162-176. https://doi.org/10.1124/mol.116.104505 [details]
2015
- Dattoli, A. A., Hink, M. A., DuBuc, T. Q., Teunisse, B. J., Goedhart, J., Röttinger, E., & Postma, M. (2015). Domain analysis of the Nematostella vectensis SNAIL ortholog reveals unique nucleolar localization that depends on the zinc-finger domains. Scientific Reports, 5, Article 12147. https://doi.org/10.1038/srep12147 [details]
- Vischer, N. O. E., Verheul, J., Postma, M., van den Berg van Saparoea, B., Galli, E., Natale, P., Gerdes, K., Luirink, J., Vollmer, W., Vicente, M., & den Blaauwen, T. (2015). Cell age dependent concentration of Escherichia coli divisome proteins analyzed with ImageJ and ObjectJ. Frontiers in Microbiology, 6, Article 586. https://doi.org/10.3389/fmicb.2015.00586 [details]
- van Unen, J., Reinhard, N. R., Yin, T., Wu, Y. I., Postma, M., Gadella, T. W. J., & Goedhart, J. (2015). Plasma membrane restricted RhoGEF activity is sufficient for RhoA-mediated actin polymerization. Scientific Reports, 5, Article 14693. https://doi.org/10.1038/srep14693 [details]
2014
- DuBuc, T. Q., Dattoli, A. A., Babonis, L. S., Salinas-Saavedra, M., Röttinger, E., Martindale, M. Q., & Postma, M. (2014). In vivo imaging of Nematostella vectensis embryogenesis and late development using fluorescent probes. BMC Cell Biology, 15, 44. https://doi.org/10.1186/s12860-014-0044-2 [details]
- Hoogendoorn, E., Crosby, K. C., Leyton-Puig, D., Breedijk, R. M. P., Jalink, K., Gadella, T. W. J., & Postma, M. (2014). The fidelity of stochastic single-molecule super-resolution reconstructions critically depends upon robust background estimation. Scientific Reports, 4, Article 3854. https://doi.org/10.1038/srep03854 [details]
- Ingaramo, M., York, A. G., Hoogendoorn, E., Postma, M., Shroff, H., & Patterson, G. H. (2014). Richardson-Lucy deconvolution as a general tool for combining images with complementary strengths. ChemPhysChem, 15(4), 794-800. https://doi.org/10.1002/cphc.201300831 [details]
- Moling, S., Pietraszewska-Bogiel, A., Postma, M., Fedorova, E., Hink, M. A., Limpens, E., Gadella, T. W. J., & Bisseling, T. (2014). Nod factor receptors form heteromeric complexes and are essential for intracellular infection in medicago nodules. The Plant Cell, 26(10), 4188-4199. https://doi.org/10.1105/tpc.114.129502 [details]
2013
- Chu, B., Postma, M., & Hardie, R. C. (2013). Fractional Ca2+ currents through TRP and TRPL channels in Drosophila photoreceptors. Biophysical Journal, 104(9), 1905-1916. https://doi.org/10.1016/j.bpj.2013.03.047 [details]
- Crosby, K. C., Postma, M., Hink, M. A., Zeelenberg, C. H. C., Adjobo-Hermans, M. J. W., & Gadella, T. W. J. (2013). Quantitative analysis of self-association and mobility of annexin A4 at the plasma membrane. Biophysical Journal, 104(9), 1875-1885. https://doi.org/10.1016/j.bpj.2013.02.057 [details]
- Hink, M. A., & Postma, M. (2013). Monitoring receptor oligomerization by line-scan fluorescence cross-correlation spectroscopy. In P. M. Conn (Ed.), Receptor-receptor interactions (pp. 197-212). (Methods in cell biology; Vol. 117). Elsevier/AP. https://doi.org/10.1016/B978-0-12-408143-7.00011-6 [details]
- van der Ploeg, R., Verheul, J., Vischer, N. O. E., Alexeeva, S., Hoogendoorn, E., Postma, M., Banzhaf, M., Vollmer, W., & den Blaauwen, T. (2013). Colocalization and interaction between elongasome and divisome during a preparative cell division phase in Escherichia coli. Molecular Microbiology, 87(5), 1074-1087. https://doi.org/10.1111/mmi.12150 [details]
2012
- Song, Z., Postma, M., Billings, S. A., Coca, D., Hardie, R. C., & Juusola, M. (2012). Stochastic, adaptive sampling of information by microvilli in fly photoreceptors. Current Biology, 22(15), 1371-1380. https://doi.org/10.1016/j.cub.2012.05.047 [details]
2011
- Tamulonis, C., Postma, M., & Kaandorp, J. (2011). Modeling filamentous cyanobacteria reveals the advantages of long and fast trichomes for optimizing light exposure. PLoS ONE, 6(7). https://doi.org/10.1371/journal.pone.0022084 [details]
- Tamulonis, C., Postma, M., Marlow, H. Q., Magie, C. R., de Jong, J., & Kaandorp, J. (2011). A cell-based model of Nematostella vectensis gastrulation including bottle cell formation, invagination and zippering. Developmental Biology, 351(1), 217-228. https://doi.org/10.1016/j.ydbio.2010.10.017 [details]
2010
- Filatov, M. V., Kaandorp, J. A., Postma, M., van Liere, R., Kruszyński, K. J., Vermeij, M. J. A., Streekstra, G. J., & Bak, R. P. M. (2010). A comparison between coral colonies of the genus Madracis and simulated forms. Proceedings of the Royal Society B-Biological Sciences, 277(1700), 3555-3561. https://doi.org/10.1098/rspb.2010.0957 [details]
2009
- Fomekong-Nanfack, Y., Postma, M., & Kaandorp, J. A. (2009). Inferring Drosophila gap gene regulatory network: A parameter sensitivity and perturbation analysis. BMC Systems Biology, 3, 94. https://doi.org/10.1186/1752-0509-3-94 [details]
- Fomekong-Nanfack, Y., Postma, M., & Kaandorp, J. A. (2009). Inferring Drosophila gap gene regulatory network: Pattern analysis of simulated gene expression profiles and stability analysis. BMC Research Notes, 2, 256. https://doi.org/10.1186/1756-0500-2-256 [details]
- Postma, M., & van Haastert, P. J. M. (2009). Mathematics of experimentally generated chemoattractant gradients. In T. Jin, & D. Hereld (Eds.), Chemotaxis: methods and protocols (pp. 473-488). (Methods in molecular biology; No. 571). Humana Press. https://doi.org/10.1007/978-1-60761-198-1_31 [details]
2008
- Kaandorp, J. A., Blom, J. G., Verhoef, J., Filatov, M., Postma, M., & Müller, W. E. G. (2008). Modelling genetic regulation of growth and form in a branching sponge. Proceedings of the Royal Society B-Biological Sciences, 275(1651), 2569-2575. https://doi.org/10.1098/rspb.2008.0746 [details]
- Liu, C. H., Satoh, A. K., Postma, M., Huang, J., Ready, D. F., & Hardie, R. C. (2008). Ca2+-dependent metarhodopsin inactivation mediated by calmodulin and NINAC myosin III. Neuron, 59(5), 778-789. https://doi.org/10.1016/j.neuron.2008.07.007 [details]
2007
- Liu, C. H., Wang, T., Postma, M., Obukhov, A. G., Montell, C., & Hardie, R. C. (2007). In Vivo Identification and Manipulation of the Ca2+ Selectivity Filter in the Drosophila Transient Receptor Potential Channel. The Journal of Neuroscience, 27(3), 604-615. https://doi.org/10.1523/JNEUROSCI.4099-06.2007 [details]
- van Haastert, P. J. M., & Postma, M. (2007). Biased Random Walk by Stochastic Fluctuations of Chemoattractant-Receptor Interactions at the Lower Limit of Detection. Biophysical Journal, 93, 1787-1796. https://doi.org/10.1529/biophysj.107.104356 [details]
2004
- Postma, M., Roelofs, J., Goedhart, J., Loovers, H. M., Visser, A. J. W. G., & Van Haastert, P. J. M. (2004). Sensitization of Dictyostelium chemotaxis by phosphoinositide-3-kinase-mediated self-organizing signalling patches. Journal of Cell Science, 117(14), 2925-2935. https://doi.org/10.1242/jcs.01143 [details]
2003
- Postma, M., Roelofs, J., Goedhart, J., Gadella, T. W. J., Visser, A. J. W. G., & Van Haastert, P. J. M. (2003). Uniform cAMP stimulation of Dictyostelium cells induces localized patches of signal transduction and pseudopodia. Molecular Biology of the Cell, 14(12), 5019-5027. https://doi.org/10.1091/mbc.E03-08-0566 [details]
Spreker
- Postma, M. (speaker) (28-10-2010). Robustness, sensitivity and dynamical behavior of a Drosophila gap gene pattern formation model, Reverse-engineering development meeting, CRG, Barcelona, Spain.
2019
- Caldas, V. E. A., Vaitla, B., Whiteside, M. D., Noë, R., Kiers, E. ., Dupin, S. E., Klein, M., Postma, M., Shimizu, T. S., Werner, G. D. A., Elbers, B., Bakker, M., Hink, M. A., West, S. A., van't Padje, A. & Wyatt, G. A. K. (2019). Data from: Mycorrhizal fungi respond to resource inequality by moving phosphorus from rich to poor patches across networks. DRYAD. https://doi.org/10.5061/dryad.n343sh3
- Bindels, D., Postma, M., Haarbosch, L., van Weeren, L. & Jr, T. (2019). Test data set for macros accompanying the publication Multi-parameter screening method for developing optimized red fluorescent proteins. Zenodo. https://doi.org/10.5281/zenodo.3347150
2017
- van Unen, J., Botman, D., Hink, M., Postma, M. & Goedhart, J. (2017). The C-terminus of the oncoprotein TGAT is necessary for plasma membrane association and efficient RhoA-mediated signaling. Zenodo. https://doi.org/10.5281/zenodo.1092754
2016
- Bindels, D., Haarbosch, L., van Weeren, L., Postma, M., Wiese, K., Mastop, M., Aumonier, S., Gotthard, G., Royant, A., Hink, M. A. & Gadella, T. W. J. (7-12-2016). Structure of the Red Fluorescent Protein mScarlet at pH 7.8. Protein Data Bank (PDB). https://doi.org/10.2210/pdb5LK4/pdb
This list of publications is extracted from the UvA-Current Research Information System. Questions? Ask the library or the Pure staff of your faculty / institute. Log in to Pure to edit your publications. Log in to Personal Page Publication Selection tool to manage the visibility of your publications on this list. -
Nevenwerkzaamheden
- Geen nevenwerkzaamheden
Arts, J. J. G., Mahlandt, E. K., Grönloh, M. L. B., Schimmel, L., Noordstra, I., Gordon, E., van Steen, A. C. I., Tol, S., Walzog, B., van Rijssel, J., Nolte, M. A., Postma, M., Khuon, S., Heddleston, J. M., Wait, E., Chew, T. L., Winter, M., Montanez, E., Goedhart, J., & van Buul, J. D. (2021). Endothelial junctional membrane protrusions serve as hotspots for neutrophil transmigration. eLife, 10, Article e66074.