Qi, W., Jonker, M. J., Teichmann, L., Wortel, M., & ter Kuile, B. H. (2023). The influence of oxygen and oxidative stress on de novo acquisition of antibiotic resistance in E. coli and Lactobacillus lactis. BMC Microbiology, 23, Article 279. https://doi.org/10.1186/s12866-023-03031-4[details]
Qi, W., Jonker, M. J., de Leeuw, W., Brul, S., & ter Kuile, B. H. (2023). Reactive oxygen species accelerate de novo acquisition of antibiotic resistance in E. coli. iScience, 26(12), Article 108373. https://doi.org/10.1016/j.isci.2023.108373[details]
Darphorn, T. S., Brul, S., & Ter Kuile, B. H. (2022). Genetic editing of multi-resistance plasmids in Escherichia coli isolated from meat during transfer. Plasmid, 122, 102640. https://doi.org/10.1016/j.plasmid.2022.102640
Darphorn, T. S., Koenders-van Sintanneland, B. B., Grootemaat, A. E., van der Wel, N. N., Brul, S., & Ter Kuile, B. H. (2022). Transfer dynamics of multi-resistance plasmids in Escherichia coli isolated from meat. PLoS ONE, 17(7), Article e0270205. https://doi.org/10.1371/journal.pone.0270205[details]
Darphorn, T. S., Bel, K., Koenders-van Sint Anneland, B. B., Brul, S., & Ter Kuile, B. H. (2021). Antibiotic resistance plasmid composition and architecture in Escherichia coli isolates from meat. Scientific Reports, 11, Article 2136. https://doi.org/10.1038/s41598-021-81683-w[details]
Darphorn, T. S., Hu, Y., Koenders-van Sintanneland, B. B., Brul, S., & ter Kuile, B. H. (2021). Multiplication of ampC upon Exposure to a Beta-Lactam Antibiotic Results in a Transferable Transposon in Escherichia coli. International Journal of Molecular Sciences, 22(17), Article 9230. https://doi.org/10.3390/ijms22179230[details]
Hoeksema, M., Jonker, M. J., Brul, S., & Ter Kuile, B. H. (2019). Effects of a previously selected antibiotic resistance on mutations acquired during development of a second resistance in Escherichia coli. BMC Genomics, 20, Article 284. https://doi.org/10.1186/s12864-019-5648-7[details]
Hoeksema, M., Brul, S., & Ter Kuile, B. H. (2018). Influence of Reactive Oxygen Species on De Novo Acquisition of Resistance to Bactericidal Antibiotics. Antimicrobial Agents and Chemotherapy, 62(6), Article e02354-17. https://doi.org/10.1128/AAC.02354-17[details]
Hoeksema, M., Jonker, M. J., Bel, K., Brul, S., & Ter Kuile, B. H. (2018). Genome rearrangements in Escherichia coli during de novo acquisition of resistance to a single antibiotic or two antibiotics successively. BMC Genomics, 19, Article 973. https://doi.org/10.1186/s12864-018-5353-y[details]
Hoeksema, M., Bel, K., Brul, S., Jonker, M. J. & Ter Kuile, B. H. (2018). Additional file 1: of Genome rearrangements in Escherichia coli during de novo acquisition of resistance to a single antibiotic or two antibiotics successively. Figshare. https://doi.org/10.6084/m9.figshare.7527944.v1
Hoeksema, M., Bel, K., Brul, S., Jonker, M. J. & Ter Kuile, B. H. (2018). Additional file 1: of Genome rearrangements in Escherichia coli during de novo acquisition of resistance to a single antibiotic or two antibiotics successively. Figshare. https://doi.org/10.6084/m9.figshare.7527944.v1
EFSA Panel on Biological Hazards, Ricci, A., Allende, A., Bolton, D., Chemaly, M., Davies, R., Fernández Escámez, P. S., Girones, R., Koutsoumanis, K., Lindqvist, R., Nørrung, B., Robertson, I., Ru, G., Sanaa, M., Simmons, M., Skandamis, P., Snary, E., Speybroeck, N., ter Kuile, B., ... Herman, L. (2017). Risk for the development of Antimicrobial Resistance (AMR) due to feeding of calves with milk containing residues of antibiotics. EFSA Journal, 15(1), Article 4665. https://doi.org/10.2903/j.efsa.2017.4665[details]
Feng, Y., van Hest, R. M., Hodiamont, C. J., Brul, S., Schultsz, C., & Ter Kuile, B. H. (2017). Optimization of therapy against Pseudomonas aeruginosa with ceftazidime and meropenem using chemostats as model for infections. FEMS Microbiology Letters, 364(14), Article fnx142. https://doi.org/10.1093/femsle/fnx142[details]
Feng, Y., Hodiamont, C. J., van Hest, R. M., Brul, S., Schultsz, C., & ter Kuile, B. H. (2016). Development of Antibiotic Resistance during Simulated Treatment of Pseudomonas aeruginosa in Chemostats. PLoS ONE, 11(2), Article e0149310. https://doi.org/10.1371/journal.pone.0149310[details]
Feng, Y., Jonker, M. J., Moustakas, I., Brul, S., & ter Kuile, B. H. (2016). Dynamics of mutations during development of resistance by Pseudomonas aeruginosa against five antibiotics. Antimicrobial Agents and Chemotherapy, 60(7), 4229-4236. Advance online publication. https://doi.org/10.1128/AAC.00434-16[details]
Händel, N., Hoeksema, M., Freijo Mata, M., Brul, S., & ter Kuile, B. H. (2016). Effects of Stress, Reactive Oxygen Species, and the SOS Response on De Novo Acquisition of Antibiotic Resistance in Escherichia coli. Antimicrobial Agents and Chemotherapy, 60(3), 1319-1327. Advance online publication. https://doi.org/10.1128/AAC.02684-15[details]
ter Kuile, B. H., Kraupner, N., & Brul, S. (2016). The risk of low concentrations of antibiotics in agriculture for resistance in human health care. FEMS Microbiology Letters, 363(19), Article fnw210. https://doi.org/10.1093/femsle/fnw210[details]
EFSA Panel on Biological Hazards (BIOHAZ), Allende, A., Bolton, D., Chemaly, M., Davies, R., Fernandez Escamez, P. S., Girones, R., Herman, L., Koutsoumanis, K., Lindqvist, R., Nørrung, B., Ricci, A., Robertson, L., Ru, G., Sanaa, M., Simmons, M., Skandamis, P., Snary, E., Speybroeck, N., ... Wahlström, H. (2015). Evaluation of heat treatments, different from those currently established in the EU legislation, that could be applied to live bivalve molluscs from B and C production areas, that have not been submitted to purification or relaying, in order to eliminate pathogenic microorganisms. EFSA Journal, 13(2), Article 4332. https://doi.org/10.2903/j.efsa.2015.4332[details]
Händel, N., Otte, S., Jonker, M. J., Brul, S., & ter Kuile, B. H. (2015). Factors that affect transfer of the IncI1 β-lactam resistance plasmid pESBL-283 between E. coli strains. PLoS ONE, 10(4), Article e0123039. https://doi.org/10.1371/journal.pone.0123039[details]
Händel, N., de la Sayette, S., Verweij, P. E., Brul, S., & ter Kuile, B. H. (2015). De novo induction of resistance against voriconazole in Aspergillus fumigatus. Journal of Global Antimicrobial Resistance, 3(1), 52-53. https://doi.org/10.1016/j.jgar.2015.01.001[details]
Feng, Y., Händel, N., de Groot, M. H. P., Brul, S., Schultsz, C., & ter Kuile, B. H. (2014). Experimental Simulation of the Effects of an Initial Antibiotic Treatment on a Subsequent Treatment after Initial Therapy Failure. Antibiotics, 3(1), 49-63. https://doi.org/10.3390/antibiotics3010049[details]
Beuchat, L. R., Komitopoulou, E., Beckers, H., Betts, R. P., Bourdichon, F., Fanning, S., Joosten, H. M., & ter Kuile, B. H. (2013). Low-water activity foods: increased concern as vehicles of foodborne pathogens. Journal of Food Protection, 76(1), 150-72. Advance online publication. https://doi.org/10.4315/0362-028X.JFP-12-211[details]
Händel, N., Schuurmans, J. M., Brul, S., & ter Kuile, B. H. (2013). Compensation of the metabolic costs of antibiotic resistance by physiological adaptation in Escherichia coli. Antimicrobial Agents and Chemotherapy, 57(8), 3752-3762. Advance online publication. https://doi.org/10.1128/AAC.02096-12[details]
Pielaat, A., Barker, G. C., Hendriksen, P., Peijnenburg, A., & ter Kuile, B. H. (2013). A foresight study on emerging technologies: State of the art of omics technologies and potential applications in food and feed safety: REPORT 1: Review on the state of art of omics technologies in risk assessment related to food and feed safety. EFSA Supporting Publications, 10(10), Article EN-495. https://doi.org/10.2903/sp.efsa.2013.EN-495[details]
ter Kuile, B., & Brul, S. (2013). Antibiotic resistance development and identification of response measures. In J. Sofos (Ed.), Advances in microbial food safety: volume 1 (pp. 157-169). (Woodhead Publishing series in food science, technology and nutrition; No. 259). Woodhead Publishing. https://doi.org/10.1533/9780857098740.2.157[details]
van der Horst, M. A., Fabri, T. H., Schuurmans, J. M., Koenders, B. B., Brul, S., & ter Kuile, B. H. (2013). Effects of therapeutical and reduced levels of antibiotics on the fraction of antibiotic-resistant strains of Escherichia coli in the chicken gut. Foodborne Pathogens and Disease, 10(1), 55-61. https://doi.org/10.1089/fpd.2012.1217[details]
Bootsma, M. C. J., van der Horst, M. A., Guryeva, T., ter Kuile, B. H., & Diekmann, O. (2012). Modeling non-inherited antibiotic resistance. Bulletin of Mathematical Biology, 74, 1691-1705. https://doi.org/10.1007/s11538-012-9731-3[details]
2011
van der Horst, M. A., Schuurmans, J. M., Smid, M. C., Koenders, B. B., & ter Kuile, B. H. (2011). De novo acquisition of resistance to three antibiotics by Escherichia coli. Microbial Drug Resistance, 17(2), 141-147. https://doi.org/10.1089/mdr.2010.0101[details]
Havelaar, A. H., Brul, S., de Jong, A., de Jonge, R., Zwietering, M. H., & ter Kuile, B. H. (2010). Future challenges to microbial food safety. International Journal of Food Microbiology, 139(S1), S79-S94. https://doi.org/10.1016/j.ijfoodmicro.2009.10.015[details]
Schuurmans, J. M., Koenders, B. B., & ter Kuile, B. H. (2010). Rapid induction of resistance to the fluoroquinolone enrofloxacin in Pseudomonas putida NCTC 10936. International Journal of Antimicrobial Agents, 35(6), 612-613. https://doi.org/10.1016/j.ijantimicag.2010.02.001[details]
2009
Schuurmans, J. M., Nuri Hayali, A. S., Koenders, B. B., & ter Kuile, B. H. (2009). Variations in MIC value caused by differences in experimental protocol. Journal of microbiological methods, 79(1), 44-47. https://doi.org/10.1016/j.mimet.2009.07.017[details]
2015
Smelt, J. P., Hoefsloot, H. C., de Koster, C. G., Schuurmans, J. M., ter Kuile, B. H., & Brul, S. (2015). Simulation of the rate of transfer of antibiotic resistance between Escherichia coli strains cultured under well controlled environmental conditions. Food Microbiology, 45(Part B), 189-194. Advance online publication. https://doi.org/10.1016/j.fm.2014.03.019[details]
Händel, N., Schuurmans, J. M., Feng, Y., Brul, S., & ter Kuile, B. H. (2014). Interaction between Mutations and Regulation of Gene Expression during Development of de novo Antibiotic Resistance. Antimicrobial Agents and Chemotherapy, 58(8), 4371-4379. Advance online publication. https://doi.org/10.1128/AAC.02892-14[details]
Schuurmans, J. M., van Hijum, S. A. F. T., Piet, J. R., Händel, N., Smelt, J., Brul, S., & ter Kuile, B. H. (2014). Effect of growth rate and selection pressure on rates of transfer of an antibiotic resistance plasmid between E. coli strains. Plasmid, 72, 1-8. Advance online publication. https://doi.org/10.1016/j.plasmid.2014.01.002[details]
ter Kuile, B. H. (speaker) (23-11-2016). Antibioticaresistentie: de weg naar de minste weerstand, Antibioticaresistentie: de weg naar de minste weerstand, Amsterdam.
2018
Hoeksema, M., Bel, K., Brul, S., Jonker, M. J. & Ter Kuile, B. H. (2018). Additional file 1: of Genome rearrangements in Escherichia coli during de novo acquisition of resistance to a single antibiotic or two antibiotics successively. Figshare. https://doi.org/10.6084/m9.figshare.7527944.v1
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