Dr. M.D. (Marc) Galland
Faculteit der Natuurwetenschappen, Wiskunde en Informatica
Swammerdam Institute for Life Sciences
Bezoekadres
- Science Park 904
Postadres
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Postbus 1210
1000 BE Amsterdam
Contactgegevens
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Publicaties
2023
Kortbeek, R. W. J., Galland, M. D., Muras, A., Therezan, R., Maia, S., Haring, M. A., Schuurink, R. C., & Bleeker, P. M. (2023). Genetic and physiological requirements for high-level sesquiterpene-production in tomato glandular trichomes. Frontiers in Plant Science, 14, Article 1139274. https://doi.org/10.3389/fpls.2023.1139274 [details]
2021
- Brandorff, E., Galland, M., & Goedhart, J. (2021). PlotXpress, a webtool for normalization and visualization of reporter expression data [version 1; peer review: 3 approved]. F1000Research, 10, Article 1125. https://doi.org/10.12688/f1000research.73641.1 [details]
- Haring, N. L., van Bree, E. J., Jordaan, W. S., Roels, J. R. E., Congrains Sotomayor, G., Hey, T. M., White, F. T. G., Galland, M. D., Smidt, M. P., & Jacobs, F. M. J. (2021). ZNF91 deletion in human embryonic stem cells leads to ectopic activation of SVA retrotransposons and up-regulation of KRAB zinc finger gene clusters. Genome Research, 31(4), 551-563. https://doi.org/10.1101/gr.265348.120 [details]
- Kortbeek, R. W. J., Galland, M. D., Muras, A., van der Kloet, F. M., André, B., Heilijgers, M., van Hijum, S. A. F. T., Haring, M. A., Schuurink, R. C., & Bleeker, P. M. (2021). Natural variation in wild tomato trichomes; selecting metabolites that contribute to insect resistance using a random forest approach. BMC plant biology, 21, Article 315. https://doi.org/10.1186/s12870-021-03070-x [details]
2018
- Stevens, S. L. R., Kuzak, M., Martinez, C., Moser, A., Bleeker, P., & Galland, M. (2018). Building a local community of practice in scientific programming for life scientists. PLoS Biology, 16(11), Article e2005561. https://doi.org/10.1371/journal.pbio.2005561 [details]
2016
- van Kleeff, P. J. M., Galland, M., Schuurink, R. C., & Bleeker, P. M. (2016). Small RNAs from Bemisia tabaci Are Transferred to Solanum lycopersicum Phloem during Feeding. Frontiers in Plant Science, 7, Article 1759. https://doi.org/10.3389/fpls.2016.01759 [details]
2022
- Allmann, S. & Galland, M. (2022). Assembled mRNAs from potato genotypes contrasted for their hexanal isomerase activity. Zenodo. https://doi.org/10.5281/zenodo.7021767
2021
- Galland, M. (12-10-2021). SNP genotype matrix for GWAS and Machine Learning analyses. Zenodo. https://doi.org/10.5281/zenodo.5596117
- Galland, M. (15-3-2021). Dataset for the microbiota data analysis Carpentry-style tutorial. Zenodo. https://doi.org/10.5281/zenodo.4605523
- Galland, M., Bleeker, P. & Gragt, M. (2-2-2021). Small RNA-seq and messenger RNA-seq of F1 cross between different species of tomato (lycopersicum, habrochaites). Zenodo. https://doi.org/10.5281/zenodo.4494409
- Galland, M., Therezan, R., Kortbeek, R. & Bleeker, P. (2-2-2021). LTP2 related material. Zenodo. https://doi.org/10.5281/zenodo.4687875
- Kortbeek, R. W. J., Galland, M., Muras, A., van der Kloet, F., André, B., Heilijgers, M., van Hijum, S. A. F. T., Haring, M. A., Schuurink, R. C. & Bleeker, P. (2021). Additional file 9 of Natural variation in wild tomato trichomes; selecting metabolites that contribute to insect resistance using a random forest approach. Figshare. https://doi.org/10.6084/m9.figshare.14903849.v1
- Kortbeek, R. W. J., Galland, M., Muras, A., van der Kloet, F., André, B., Heilijgers, M., van Hijum, S. A. F. T., Haring, M. A., Schuurink, R. C. & Bleeker, P. (2021). Additional file 10 of Natural variation in wild tomato trichomes; selecting metabolites that contribute to insect resistance using a random forest approach. Figshare. https://doi.org/10.6084/m9.figshare.14903819.v1
- Kortbeek, R. W. J., Galland, M., Muras, A., van der Kloet, F., André, B., Heilijgers, M., van Hijum, S. A. F. T., Haring, M. A., Schuurink, R. C. & Bleeker, P. (2021). Additional file 11 of Natural variation in wild tomato trichomes; selecting metabolites that contribute to insect resistance using a random forest approach. Figshare. https://doi.org/10.6084/m9.figshare.14903822.v1
2020
- Galland, M., Gragt, M. & Bleeker, P. (17-11-2020). Processed data for the sRNA landscape chapter. Zenodo. https://doi.org/10.5281/zenodo.5564147
- Galland, M. (13-10-2020). Fastq test files for Snakemake pipelines. Zenodo. https://doi.org/10.5281/zenodo.5654867
- Galland, M. (6-10-2020). Human tissue gene expression TPM values for the advanced forensic biology course. Zenodo. https://doi.org/10.5281/zenodo.4073231
- Galland, M. (28-9-2020). CpG methylation beta values and sample age for the advanced forensic biology lesson. Zenodo. https://doi.org/10.5281/zenodo.4056406
- Bleeker, P. & Galland, M. (17-9-2020). DNA-seq of Solanum habrochaites PI127826 and LA1777 DNA (part II). Zenodo. https://doi.org/10.5281/zenodo.4268097
- Galland, M. & Bleeker, P. (17-8-2020). DNA-seq of Solanum habrochaites PI127826 and LA1777 DNA (part I). Zenodo. https://doi.org/10.5281/zenodo.4618196
- Bliek, T. & Galland, M. (6-5-2020). Datasets for the Carpentry-style RNA-seq lesson. Zenodo. https://doi.org/10.5281/zenodo.6325891
- Galland, M. & Bleeker, P. (7-4-2020). Stem trichome small RNA-Seq from the 20 accessions. Zenodo. https://doi.org/10.5281/zenodo.3742788
- Galland, M. & Bleeker, P. (24-1-2020). Scaled counts of trichome mRNA-seq from the 20 accessions. Zenodo. https://doi.org/10.5281/zenodo.3627091
2019
- Galland, M. & Bleeker, P. (12-12-2019). Stem trichome PARE-Seq (degradome) data from the 20 accessions. Zenodo. https://doi.org/10.5281/zenodo.4034262
- Galland, M. & Bleeker, P. (18-10-2019). Genomic sequences and annotations for Solanum lycopersicum, Solanum pennellii and Solanum habrochaites. Zenodo. https://doi.org/10.5281/zenodo.5761962
- Galland, M., Bleeker, P. & Kortbeek, R. (25-3-2019). Stem trichome mRNA-Seq from S. lycopersicum x S. habrochaites PI127826 crosses (F2 lines). Zenodo. https://doi.org/10.5281/zenodo.4491747
2018
- Galland, M. (4-11-2018). Dataset for the 20181106 study group lesson (data visualisation). Zenodo. https://doi.org/10.5281/zenodo.1477672
2017
- Galland, M., Kortbeek, R. & Bleeker, P. (23-11-2017). Stem trichome mRNA-Seq from lycopersicum x habrochaites crosses (Parents and F1). Zenodo. https://doi.org/10.5281/zenodo.4322913
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Nevenwerkzaamheden
Geen nevenwerkzaamheden
Kortbeek, R. W. J., Galland, M. D., Muras, A., Therezan, R., Maia, S., Haring, M. A., Schuurink, R. C., & Bleeker, P. M. (2023). Genetic and physiological requirements for high-level sesquiterpene-production in tomato glandular trichomes. Frontiers in Plant Science, 14, Article 1139274.